Information for motif39


Reverse Opposite:

p-value:1e-6
log p-value:-1.563e+01
Information Content per bp:1.736
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif7.20%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif2.00%
Average Position of motif in Targets169.0 +/- 86.5bp
Average Position of motif in Background148.2 +/- 116.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TATATATATATA--
TGTATATATATACC

PB0080.1_Tbp_1/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TATATATATATA----
NANTTATATATAANGN

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TATATATATATA----
ANNNGGATATATCCNNN

MA0033.1_FOXL1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TATATATATATA
--TATACATA--

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TATATATATATA
NNNNNNCTTTTATAN---

MA0108.2_TBP/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TATATATATATA
NNNNNNCTTTTATAN---

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TATATATATATA-----
TAAATACATGTAAAATT

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TATATATATATA-----
AAAATACATGTAAAAAT

PH0148.1_Pou3f3/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TATATATATATA-----
AAAATATGCATAATAAA

MA0042.1_FOXI1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TATATATATATA
GGATGTTTGTTT-