Information for motif40


Reverse Opposite:

p-value:1e-5
log p-value:-1.358e+01
Information Content per bp:1.701
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif8.80%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif2.99%
Average Position of motif in Targets148.1 +/- 72.3bp
Average Position of motif in Background91.9 +/- 49.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGATGATAAMAG
---AGATAASR-

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGATGATAAMAG
-NBWGATAAGR-

MA0482.1_Gata4/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGATGATAAMAG
NNGAGATAAGA-

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGATGATAAMAG---
TAAACTGATAAGAAGAT

PB0023.1_Gata6_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGATGATAAMAG---
TATAGAGATAAGAATTG

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGATGATAAMAG-----
NANAGATCAAAGGGNNN

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGATGATAAMAG
-CATGAC-----

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGATGATAAMAG
--NAGATAAGNN

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGATGATAAMAG
--ATGATGCAAT

MA0036.2_GATA2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGATGATAAMAG---
-NCAGATAAGAANNN