Information for motif9


Reverse Opposite:

p-value:1e-23
log p-value:-5.327e+01
Information Content per bp:1.699
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets128.9 +/- 88.0bp
Average Position of motif in Background124.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:WGCCTGTGAATC-
-GSCTGTCACTCA

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----WGCCTGTGAATC
NNNNTGCCAGTGATTG

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:WGCCTGTGAATC--
--NCTGTCAATCAN

MA0099.2_JUN::FOS/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:forward strand
Alignment:WGCCTGTGAATC-
------TGACTCA

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---WGCCTGTGAATC-
AAGCACCTGTCAATAT

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:WGCCTGTGAATC
--GCTGTG----

MA0476.1_FOS/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:WGCCTGTGAATC---
----TGTGACTCATT

MA0477.1_FOSL1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:WGCCTGTGAATC---
----GGTGACTCATG

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:WGCCTGTGAATC---
-----ATGACTCATC

MA0491.1_JUND/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:WGCCTGTGAATC---
----GGTGACTCATC