p-value: | 1e-19 |
log p-value: | -4.398e+01 |
Information Content per bp: | 1.580 |
Number of Target Sequences with motif | 1002.0 |
Percentage of Target Sequences with motif | 12.24% |
Number of Background Sequences with motif | 2998.2 |
Percentage of Background Sequences with motif | 9.21% |
Average Position of motif in Targets | 463.4 +/- 440.6bp |
Average Position of motif in Background | 455.7 +/- 458.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.18 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTGGGCRACA- SCCTAGCAACAG |
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MA0510.1_RFX5/Jaspar
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CTGGGCRACA-- CTCCCTGGCAACAGC |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTGGGCRACA--- -TGAGTGACAGSC |
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Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGGGCRACA-- NTGATTGACAGN |
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MA0498.1_Meis1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTGGGCRACA--- NNNTGAGTGACAGCT |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CTGGGCRACA------ ACTGACCCTTGGTTACCACAAAG |
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MA0509.1_Rfx1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CTGGGCRACA GTTGCCATGGCAAC- |
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PB0117.1_Eomes_2/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTGGGCRACA------- -NNGGCGACACCTCNNN |
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MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTGGGCRACA- AGGTGNCAGACAG |
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Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGGGCRACA AGGTGHCAGACA |
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