| p-value: | 1e-19 |
| log p-value: | -4.398e+01 |
| Information Content per bp: | 1.580 |
| Number of Target Sequences with motif | 1002.0 |
| Percentage of Target Sequences with motif | 12.24% |
| Number of Background Sequences with motif | 2998.2 |
| Percentage of Background Sequences with motif | 9.21% |
| Average Position of motif in Targets | 463.4 +/- 440.6bp |
| Average Position of motif in Background | 455.7 +/- 458.6bp |
| Strand Bias (log2 ratio + to - strand density) | 0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.18 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 1 |
| Score: | 0.65
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -CTGGGCRACA-
SCCTAGCAACAG |
|
|
|
MA0510.1_RFX5/Jaspar
| Match Rank: | 2 |
| Score: | 0.63
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---CTGGGCRACA--
CTCCCTGGCAACAGC |
|
|
|
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
| Match Rank: | 3 |
| Score: | 0.62
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CTGGGCRACA---
-TGAGTGACAGSC |
|
|
|
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 4 |
| Score: | 0.61
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CTGGGCRACA--
NTGATTGACAGN |
|
|
|
MA0498.1_Meis1/Jaspar
| Match Rank: | 5 |
| Score: | 0.60
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CTGGGCRACA---
NNNTGAGTGACAGCT |
|
|
|
PB0158.1_Rfx3_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.59
| | Offset: | -7
| | Orientation: | forward strand |
| Alignment: | -------CTGGGCRACA------
ACTGACCCTTGGTTACCACAAAG |
|
|
|
MA0509.1_Rfx1/Jaspar
| Match Rank: | 7 |
| Score: | 0.57
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----CTGGGCRACA
GTTGCCATGGCAAC- |
|
|
|
PB0117.1_Eomes_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.56
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CTGGGCRACA-------
-NNGGCGACACCTCNNN |
|
|
|
MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
| Match Rank: | 9 |
| Score: | 0.56
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CTGGGCRACA-
AGGTGNCAGACAG |
|
|
|
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CTGGGCRACA
AGGTGHCAGACA |
|
|
|
