Information for motif10


Reverse Opposite:

p-value:1e-12
log p-value:-2.947e+01
Information Content per bp:1.454
Number of Target Sequences with motif485.0
Percentage of Target Sequences with motif5.92%
Number of Background Sequences with motif1369.8
Percentage of Background Sequences with motif4.21%
Average Position of motif in Targets454.8 +/- 417.6bp
Average Position of motif in Background478.0 +/- 452.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TGAGACCGTG--
ATAAATGACACCTATCA

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGAGACCGTG
ACTGAAACCA--

MA0592.1_ESRRA/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGAGACCGTG-
NGTGACCTTGG

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGACCGTG--
AATNTTGATACCCTATN

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGAGACCGTG
CTTGAGTGGCT-

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGAGACCGTG-
---GGACGTGC

PH0161.1_Six1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGACCGTG--
ANNNATGATACCCCATC

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGACCGTG--
ANANNTGATACCCNATN

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TGAGACCGTG
TATCATTAGAACGCT

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGAGACCGTG--
--TGACCTTGAN