Information for motif12


Reverse Opposite:

p-value:1e-10
log p-value:-2.462e+01
Information Content per bp:1.507
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets386.6 +/- 421.6bp
Average Position of motif in Background361.5 +/- 291.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CGCAATATGACA
-----CATGAC-

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGCAATATGACA-
-GWAAYHTGABMC

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGCAATATGACA
NNTNNCAATATTAG-

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGCAATATGACA-------
--GATATTGACAGCTGCGT

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGCAATATGACA-------
--ATAAATGACACCTATCA

MA0095.2_YY1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGCAATATGACA--
--CAAGATGGCGGC

PB0106.1_Arid5a_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCAATATGACA---
CATACAATACGAAATAA

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGCAATATGACA-------
---NNATTGACAGGTGCTT

MA0498.1_Meis1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGCAATATGACA---
NNNTGAGTGACAGCT

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGCAATATGACA-------
---GTATTGACAGGTNNTT