Information for motif13


Reverse Opposite:

p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.842
Number of Target Sequences with motif335.0
Percentage of Target Sequences with motif4.09%
Number of Background Sequences with motif936.2
Percentage of Background Sequences with motif2.88%
Average Position of motif in Targets483.4 +/- 472.9bp
Average Position of motif in Background483.8 +/- 463.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GATCGCGCCA-
-ATCACCCCAT

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GATCGCGCCA-
CNGTCACGCCAC

MA0161.1_NFIC/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GATCGCGCCA-
-----TGCCAA

MA0596.1_SREBF2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GATCGCGCCA-
-ATCACCCCAT

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GATCGCGCCA
-AGCGCGCC-

MA0595.1_SREBF1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GATCGCGCCA-
-ATCACCCCAC

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATCGCGCCA-----
CCTTCGGCGCCAAAAGG

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GATCGCGCCA-
-ATTGCGCAAC

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATCGCGCCA-----
AGCTCGGCGCCAAAAGC

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GATCGCGCCA-------
-ACTATGCCAACCTACC