Information for motif14


Reverse Opposite:

p-value:1e-9
log p-value:-2.121e+01
Information Content per bp:1.919
Number of Target Sequences with motif1446.0
Percentage of Target Sequences with motif17.66%
Number of Background Sequences with motif4944.8
Percentage of Background Sequences with motif15.19%
Average Position of motif in Targets486.6 +/- 434.8bp
Average Position of motif in Background476.1 +/- 466.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCTGG
BCAGACWA-

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAGCCTGG
CTGTCTGG

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCTGG
CACAGN----

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAGCCTGG---
-GGTCTGGCAT

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGCCTGG
CAGCC---

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCCTGG
VBSYGTCTGG

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAGCCTGG-----
NNTNNTGTCTGGNNTNG

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCTGG--
CCACACAGCAGGAGA

POL002.1_INR/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGCCTGG
TCAGTCTT-

MA0088.1_znf143/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CAGCCTGG------
GCAAGGCATGATGGGAAATC