Information for motif16


Reverse Opposite:

p-value:1e-8
log p-value:-1.886e+01
Information Content per bp:1.836
Number of Target Sequences with motif442.0
Percentage of Target Sequences with motif5.40%
Number of Background Sequences with motif1331.3
Percentage of Background Sequences with motif4.09%
Average Position of motif in Targets409.2 +/- 383.7bp
Average Position of motif in Background438.9 +/- 402.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TAAATCAATA-
-DGATCRATAN

MA0042.1_FOXI1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TAAATCAATA---
-AAACAAACANNC

MA0485.1_Hoxc9/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCAATA
GGCCATAAATCAC--

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCAATA
GGCCATAAATCA---

MA0594.1_Hoxa9/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TAAATCAATA
GCCATAAATCA---

MA0041.1_Foxd3/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TAAATCAATA---
-AAACAAACATTC

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:7
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCAATA
GGCCATAAATCA---

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TAAATCAATA---
AATCAATTCAATAATT

PH0172.1_Tlx2/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TAAATCAATA----
TAATTAATTAATAACTA

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TAAATCAATA
-AAATAAACA