Information for motif19


Reverse Opposite:

p-value:1e-6
log p-value:-1.522e+01
Information Content per bp:1.819
Number of Target Sequences with motif354.0
Percentage of Target Sequences with motif4.32%
Number of Background Sequences with motif1068.5
Percentage of Background Sequences with motif3.28%
Average Position of motif in Targets453.3 +/- 459.0bp
Average Position of motif in Background494.5 +/- 470.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTATTCGT-----
NTTATTCGTCATNC

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTATTCGT------
ACATTCATGACACG

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTATTCGT-----
GACCACATTCATACAAT

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTATTCGT--
CTATTTTTGG

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTATTCGT----
ATGGAAAGTCGTAAAA

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTATTCGT---
KCTATTTTTRGH

MA0052.2_MEF2A/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTATTCGT----
NNGCTATTTTTAGCN

MA0497.1_MEF2C/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTATTCGT-----
TTCTATTTTTAGNNN

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTATTCGT----
GNNATTTGTCGTAANN

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTATTCGT--
GCATTCCAGN