Information for motif22


Reverse Opposite:

p-value:1e-5
log p-value:-1.370e+01
Information Content per bp:1.711
Number of Target Sequences with motif1311.0
Percentage of Target Sequences with motif16.01%
Number of Background Sequences with motif4605.9
Percentage of Background Sequences with motif14.15%
Average Position of motif in Targets452.6 +/- 406.8bp
Average Position of motif in Background472.5 +/- 427.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------CAATTCTA
NNCNNAACAATTNT-

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------CAATTCTA--
TNCNNAACAATTTTTNC

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAATTCTA------
TATAATTATAATATTC

MA0063.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAATTCTA
CAATTAA-

MA0125.1_Nobox/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CAATTCTA
ACCAATTA--

PH0022.1_Dlx3/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CAATTCTA----
NNNGGTAATTATNGNGN

PB0064.1_Sox14_1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CAATTCTA------
GCTAATTATAATTATC

PB0069.1_Sox21_1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CAATTCTA------
NNTAATTATAATNANN

PH0021.1_Dlx2/Jaspar

Match Rank:9
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CAATTCTA--
CTGANNTAATTATNNN

PB0172.1_Sox1_2/Jaspar

Match Rank:10
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CAATTCTA-
NNNTAACAATTATAN