Information for motif26


Reverse Opposite:

p-value:1e-4
log p-value:-1.113e+01
Information Content per bp:1.972
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets390.9 +/- 404.9bp
Average Position of motif in Background1272.2 +/- 1176.5bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0469.1_E2F3/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGCGAGCGGGTG
NNGTGNGGGCGGGAG

MA0472.1_EGR2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGCGAGCGGGTG----
-GTGCGTGGGCGGGNG

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGCGAGCGGGTG
--TGCGTGGGYG

MA0527.1_ZBTB33/Jaspar

Match Rank:4
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------CGCGAGCGGGTG
NAGNTCTCGCGAGAN----

MA0162.2_EGR1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCGAGCGGGTG
GGCGGGGGCGGGGG

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGCGAGCGGGTG--
--NGCGTGGGCGGR

PB0095.1_Zfp161_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGCGAGCGGGTG-
TGGCGCGCGCGCCTGA

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGCGAGCGGGTG--
----NNCAGGTGNN

MA0024.2_E2F1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGCGAGCGGGTG-
--CGGGCGGGAGG

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CGCGAGCGGGTG
ANTGCGGGGGCGGN--