Information for motif27


Reverse Opposite:

p-value:1e-4
log p-value:-1.053e+01
Information Content per bp:1.950
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif61.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets564.0 +/- 446.0bp
Average Position of motif in Background709.8 +/- 582.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCTCCCG
GGTCCCGCCC-

MA0471.1_E2F6/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCTCCCG
NCTTCCCGCCC-

MA0599.1_KLF5/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTCCCTCCCG
GCCCCGCCCC

MA0079.3_SP1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTCCCTCCCG-
GCCCCGCCCCC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTCCCTCCCG
GCCMCRCCCH

MA0470.1_E2F4/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTCCCTCCCG---
--NNTTCCCGCCC

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTCCCTCCCG-----
ACCACTCTCGGTCAC

MA0469.1_E2F3/Jaspar

Match Rank:8
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GTCCCTCCCG---------
----CTCCCGCCCCCACTC

MA0024.2_E2F1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GTCCCTCCCG----
---CCTCCCGCCCN

MA0516.1_SP2/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTCCCTCCCG-----
GCCCCGCCCCCTCCC