p-value: | 1e-3 |
log p-value: | -8.147e+00 |
Information Content per bp: | 1.559 |
Number of Target Sequences with motif | 13.0 |
Percentage of Target Sequences with motif | 0.16% |
Number of Background Sequences with motif | 16.9 |
Percentage of Background Sequences with motif | 0.05% |
Average Position of motif in Targets | 334.7 +/- 285.2bp |
Average Position of motif in Background | 372.6 +/- 325.1bp |
Strand Bias (log2 ratio + to - strand density) | -3.4 |
Multiplicity (# of sites on avg that occur together) | 1.77 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TAGGACAGTCTG--- VAGRACAKNCTGTBC |
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GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TAGGACAGTCTG--- VAGRACAKWCTGTYC |
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MA0113.2_NR3C1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TAGGACAGTCTG---- -AGNACATTNTGTTCT |
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MA0007.2_AR/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TAGGACAGTCTG--- AAGAACAGAATGTTC |
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ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TAGGACAGTCTG---- NAGAACAGNCTGTNCT |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TAGGACAGTCTG- -----TWGTCTGV |
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GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TAGGACAGTCTG----- -AGNACANNNTGTNCTN |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TAGGACAGTCTG- -----CTGTCTGG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TAGGACAGTCTG- ---VBSYGTCTGG |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TAGGACAGTCTG-- TTAAGAACAATAAATT |
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