Information for motif33


Reverse Opposite:

p-value:1e-2
log p-value:-6.324e+00
Information Content per bp:1.657
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.05%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets631.3 +/- 339.0bp
Average Position of motif in Background631.6 +/- 195.5bp
Strand Bias (log2 ratio + to - strand density)-3.4
Multiplicity (# of sites on avg that occur together)5.75
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0038.1_Gfi1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CATCCAATCTCA-
---CAAATCACTG

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CATCCAATCTCA
ACTAGCCAATCA--

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CATCCAATCTCA
NNNTCCATCCCATAANN

MA0502.1_NFYB/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CATCCAATCTCA
AAATGGACCAATCAG-

MA0483.1_Gfi1b/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CATCCAATCTCA---
----AAATCACAGCA

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATCCAATCTCA
AGATGCAATCCC-

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATCCAATCTCA
-AGCCAATCGG-

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CATCCAATCTCA--
----AAATCACTGC

MA0468.1_DUX4/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CATCCAATCTCA
TAATTTAATCA--

MA0130.1_ZNF354C/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CATCCAATCTCA
-ATCCAC-----