Information for motif35


Reverse Opposite:

p-value:1e-1
log p-value:-4.135e+00
Information Content per bp:1.982
Number of Target Sequences with motif1318.0
Percentage of Target Sequences with motif16.09%
Number of Background Sequences with motif4957.2
Percentage of Background Sequences with motif15.23%
Average Position of motif in Targets566.2 +/- 501.5bp
Average Position of motif in Background558.1 +/- 490.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGGCGGGA----
NAGANTGGCGGGGNGNA

MA0471.1_E2F6/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:forward strand
Alignment:AGAGAGGCGGGA---
----GGGCGGGAAGG

MA0516.1_SP2/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAGGCGGGA-
GGGNGGGGGCGGGGC

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AGAGAGGCGGGA-
---CWGGCGGGAA

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.70
Offset:5
Orientation:forward strand
Alignment:AGAGAGGCGGGA---
-----GGCGGGAARN

MA0470.1_E2F4/Jaspar

Match Rank:6
Score:0.69
Offset:4
Orientation:forward strand
Alignment:AGAGAGGCGGGA---
----GGGCGGGAAGG

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:AGAGAGGCGGGA----
----TGGCGGGAAAHB

MA0024.2_E2F1/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AGAGAGGCGGGA--
---CGGGCGGGAGG

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.67
Offset:5
Orientation:forward strand
Alignment:AGAGAGGCGGGA---
-----GGCGGGAAAH

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGAGAGGCGGGA-
--GGGGGCGGGGC