Information for motif5


Reverse Opposite:

p-value:1e-15
log p-value:-3.497e+01
Information Content per bp:1.608
Number of Target Sequences with motif682.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1985.9
Percentage of Background Sequences with motif6.10%
Average Position of motif in Targets485.4 +/- 450.9bp
Average Position of motif in Background482.3 +/- 462.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0470.1_E2F4/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCARGAGAAT
GGGCGGGAAGG-

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCARGAGAAT
GGCGGGAAAH-

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCARGAGAAT
GGCGGGAARN-

MA0024.2_E2F1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCARGAGAAT
CGGGCGGGAGG--

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCARGAGAAT
TGGCGGGAAAHB

MA0471.1_E2F6/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCARGAGAAT
GGGCGGGAAGG-

MA0469.1_E2F3/Jaspar

Match Rank:7
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------GCARGAGAAT
NNGTGNGGGCGGGAG---

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCARGAGAAT
CACAGCAGGGGG--

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------GCARGAGAAT
CCACACAGCAGGAGA--

MA0142.1_Pou5f1::Sox2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCARGAGAAT-
ATTTGCATAACAAAG