Information for motif6


Reverse Opposite:

p-value:1e-13
log p-value:-3.191e+01
Information Content per bp:1.681
Number of Target Sequences with motif844.0
Percentage of Target Sequences with motif10.31%
Number of Background Sequences with motif2582.4
Percentage of Background Sequences with motif7.94%
Average Position of motif in Targets476.2 +/- 430.0bp
Average Position of motif in Background488.8 +/- 453.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCTACTTGRGWG
ACATGCTACCTAATAC

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCTACTTGRGWG
ACTTGCTACCTACACC

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCTACTTGRGWG
CNNNGCTACTGTANNN

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTACTTGRGWG
NGCTN--------

PH0098.1_Lhx8/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCTACTTGRGWG-
CACCGCTAATTAGNNGN

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCTACTTGRGWG
TNNTGCTACTGTNNNN

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCTACTTGRGWG--
----CTYRAGTGSY

PH0097.1_Lhx6_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCTACTTGRGWG-
NNNCGCTAATTAGNNGA

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCTACTTGRGWG---
----CTTGAGTGGCT

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCTACTTGRGWG
-CTATTTTTGG-