Information for motif7


Reverse Opposite:

p-value:1e-13
log p-value:-3.138e+01
Information Content per bp:1.713
Number of Target Sequences with motif1253.0
Percentage of Target Sequences with motif15.30%
Number of Background Sequences with motif4055.5
Percentage of Background Sequences with motif12.46%
Average Position of motif in Targets472.5 +/- 421.8bp
Average Position of motif in Background472.9 +/- 440.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGGACAGGAGTT
--AACAGGAAGT

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGGACAGGAGTT
--NACAGGAAAT

MA0098.2_Ets1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGACAGGAGTT---
NNNACAGGAAGTGGN

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGACAGGAGTT
--NACAGGAAAT

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGGACAGGAGTT-
---ACAGGAAGTG

MA0156.1_FEV/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGGACAGGAGTT
----CAGGAAAT

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGACAGGAGTT-
---ACAGGAAGTG

PB0047.1_Myf6_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGACAGGAGTT--
GAAGAACAGGTGTCCG

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGGACAGGAGTT
CAAAGGTCAG-----

MA0160.1_NR4A2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGACAGGAGTT
AAGGTCAC-----