p-value: | 1e-13 |
log p-value: | -3.119e+01 |
Information Content per bp: | 1.698 |
Number of Target Sequences with motif | 1309.0 |
Percentage of Target Sequences with motif | 15.98% |
Number of Background Sequences with motif | 4262.7 |
Percentage of Background Sequences with motif | 13.10% |
Average Position of motif in Targets | 473.6 +/- 432.1bp |
Average Position of motif in Background | 478.5 +/- 456.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.40 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGGATTACAGA NGGGATTA---- |
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PH0137.1_Pitx1/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGGGATTACAGA- TTAGAGGGATTAACAAT |
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MA0019.1_Ddit3::Cebpa/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGGGATTACAGA- -GGGATTGCATNN |
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PH0035.1_Gsc/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGGGATTACAGA-- NNAAGGGATTAACGANT |
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PH0122.1_Obox2/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGGGATTACAGA- TGAGGGGGATTAACTAT |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGGGATTACAGA --GGATTAGC-- |
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PH0121.1_Obox1/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGGGATTACAGA- TTAAGGGGATTAACTAC |
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PH0126.1_Obox6/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGGGATTACAGA AAAAACGGATTATTG- |
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PH0123.1_Obox3/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGGGATTACAGA- TGAGGGGGATTAACTAT |
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PH0125.1_Obox5_2/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGGGATTACAGA-- NANAGGGATTAATTATN |
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