Information for motif1


Reverse Opposite:

p-value:1e-17
log p-value:-4.085e+01
Information Content per bp:1.522
Number of Target Sequences with motif926.0
Percentage of Target Sequences with motif11.31%
Number of Background Sequences with motif1500.4
Percentage of Background Sequences with motif8.50%
Average Position of motif in Targets465.1 +/- 411.2bp
Average Position of motif in Background499.5 +/- 450.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0009.1_T/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCASCTAYT
TTCACACCTAG-

MA0522.1_Tcf3/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCCASCTAYT-
CACAGCTGCAG

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CCCASCTAYT----
------TACTNNNN

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCCASCTAYT------
TNNTGCTACTGTNNNN

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCCASCTAYT------
CNNNGCTACTGTANNN

MA0132.1_Pdx1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCCASCTAYT-
-----CTAATT

PH0032.1_Evx2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCASCTAYT-------
CACCGCTAATTAGCGGT

MA0057.1_MZF1_5-13/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCCASCTAYT
TTCCCCCTAC-

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCCASCTAYT------
ACTTGCTACCTACACC

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCCASCTAYT-----
-----CTATTTTTGG