Information for motif14


Reverse Opposite:

p-value:1e-10
log p-value:-2.330e+01
Information Content per bp:1.901
Number of Target Sequences with motif445.0
Percentage of Target Sequences with motif5.43%
Number of Background Sequences with motif701.6
Percentage of Background Sequences with motif3.98%
Average Position of motif in Targets470.2 +/- 426.9bp
Average Position of motif in Background471.3 +/- 431.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GTAGGATT-----
CTACTAGGATGTNNTN

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTAGGATT-
-NGGGATTA

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GTAGGATT---
---GGATTAGC

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTAGGATT------
TGAACCGGATTAATGAA

PH0137.1_Pitx1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTAGGATT------
TTAGAGGGATTAACAAT

PH0138.1_Pitx2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTAGGATT-------
TGAAGGGATTAATCATC

MA0467.1_Crx/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTAGGATT--
AAGAGGATTAG

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTAGGATT-------
AGGGGGATTAGCTGCC

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GTAGGATT--
TGCGGAGTGGGACTGG

PH0126.1_Obox6/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTAGGATT----
AAAAACGGATTATTG