Information for motif16


Reverse Opposite:

p-value:1e-9
log p-value:-2.273e+01
Information Content per bp:1.979
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets314.5 +/- 276.0bp
Average Position of motif in Background395.0 +/- 382.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0027.1_En1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTCAGTAGTG---
--AAGTAGTGCCC

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTCAGTAGTG---
ATGTACAGTAGCAAAG

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTCAGTAGTG---
ATTTACAGTAGCAAAA

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTCAGTAGTG---
NTNNTTAAGTGGNTNAN

POL002.1_INR/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTCAGTAGTG
-TCAGTCTT-

MA0032.1_FOXC1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTCAGTAGTG
GGTAAGTA---

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTCAGTAGTG---
NTNNTTAAGTGGTTANN

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TTCAGTAGTG
AATCAATTCAATAATT

PH0175.1_Vax2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGTAGTG---
GNCTTAATTAGTGNNN

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTCAGTAGTG
TTAAGTGCTT