Information for motif19


Reverse Opposite:

p-value:1e-8
log p-value:-2.046e+01
Information Content per bp:1.884
Number of Target Sequences with motif1161.0
Percentage of Target Sequences with motif14.18%
Number of Background Sequences with motif2114.3
Percentage of Background Sequences with motif11.98%
Average Position of motif in Targets457.4 +/- 441.1bp
Average Position of motif in Background476.7 +/- 449.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.86
Offset:-5
Orientation:forward strand
Alignment:-----CAAAAAAA----
GTTAAAAAAAAAAATTA

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.84
Offset:-5
Orientation:forward strand
Alignment:-----CAAAAAAA-
TACTGGAAAAAAAA

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----CAAAAAAA-----
GTTCAAAAAAAAAATTC

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CAAAAAAA----
AACAAACAACAAGAG

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CAAAAAAA--
AGCCGAAAAAAAAAT

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CAAAAAAA----
CTACCAATAAAATTCT

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------CAAAAAAA-
CAATTGCAAAAATAT

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAAAAAAA
GTCATAAAAN

MA0497.1_MEF2C/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CAAAAAAA---
ATGCTAAAAATAGAA

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CAAAAAAA----
AACCCAATAAAATTCG