Information for motif21


Reverse Opposite:

p-value:1e-8
log p-value:-2.013e+01
Information Content per bp:1.735
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets410.2 +/- 301.5bp
Average Position of motif in Background665.8 +/- 311.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0105.1_Arid3a_2/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CATCCAATATCA-----
--ACCCGTATCAAATTT

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATCCAATATCA-
NNTNNCAATATTAG

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CATCCAATATCA---
CAAACAACAACACCT

MA0592.1_ESRRA/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CATCCAATATCA--
---CCAAGGTCACA

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CATCCAATATCA-----
TATTCAAGGTCATGCGA

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CATCCAATATCA-----
--TNGAATTTCATTNAN

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CATCCAATATCA
AGATGCAATCCC-

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CATCCAATATCA----
AACCCAATAAAATTCG

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CATCCAATATCA
NNNTCCATCCCATAANN

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CATCCAATATCA-----
AAGGCGAAATCATCGCA