Information for motif22


Reverse Opposite:

p-value:1e-8
log p-value:-1.887e+01
Information Content per bp:1.939
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets332.9 +/- 387.9bp
Average Position of motif in Background475.0 +/- 344.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCTATCTCA
YSTTATCT--

MA0037.2_GATA3/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTCTATCTCA
TCTTATCT--

Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCTATCTCA-
TGTCTGDCACCT

MA0033.1_FOXL1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTCTATCTCA-
---TATGTNTA

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCTATCTCA-
CTGTCTGTCACCT

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTCTATCTCA--
--CTATTTTTGG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCTATCTCA
TWGTCTGV----

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTCTATCTCA---
-KCTATTTTTRGH

MA0029.1_Mecom/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTCTATCTCA----
TNTTATCTTATCTT

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GTCTATCTCA
VBSYGTCTGG----