Information for motif23


Reverse Opposite:

p-value:1e-7
log p-value:-1.826e+01
Information Content per bp:1.530
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets534.5 +/- 343.0bp
Average Position of motif in Background723.1 +/- 398.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---ATCAGGTGCA----
ATCCACAGGTGCGAAAA

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:ATCAGGTGCA
NNCAGGTGNN

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATCAGGTGCA
ACCACGTG--

MA0103.2_ZEB1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ATCAGGTGCA-
--CAGGTGAGG

MA0464.1_Bhlhe40/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATCAGGTGCA-
CTCACGTGCAC

MA0499.1_Myod1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATCAGGTGCA
NGNGACAGCTGCN

MA0521.1_Tcf12/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATCAGGTGCA-
AACAGCTGCAG

bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATCAGGTGCA
NGKCACGTGM-

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATCAGGTGCA----
CTCAGCAGCTGCTACTG

MA0500.1_Myog/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATCAGGTGCA-
GACAGCTGCAG