Information for motif24


Reverse Opposite:

p-value:1e-7
log p-value:-1.716e+01
Information Content per bp:1.856
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets411.3 +/- 449.6bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0596.1_SREBF2/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGATGAGCTGAT
--ATGGGGTGAT

MA0595.1_SREBF1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGATGAGCTGAT
--GTGGGGTGAT

GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGATGAGCTGAT---
AGATGKDGAGATAAG

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGATGAGCTGAT
TAAACTGATAAGAAGAT

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGATGAGCTGAT-
AAAGATGATGTCATC

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TGATGAGCTGAT
GACGATAATGAGCTTGC

MA0488.1_JUN/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGATGAGCTGAT
AAGATGATGTCAT

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGATGAGCTGAT
NGATGACGTCAT

PH0016.1_Cux1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TGATGAGCTGAT
ACCGGTTGATCACCTGA-

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGATGAGCTGAT
NBWGATAAGR----