Information for motif3


Reverse Opposite:

p-value:1e-17
log p-value:-4.030e+01
Information Content per bp:1.572
Number of Target Sequences with motif666.0
Percentage of Target Sequences with motif8.13%
Number of Background Sequences with motif1019.8
Percentage of Background Sequences with motif5.78%
Average Position of motif in Targets446.8 +/- 402.9bp
Average Position of motif in Background468.4 +/- 445.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AGMMCAGGARKT
--AACAGGAAGT

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:AGMMCAGGARKT-
---ACAGGAAGTG

MA0098.2_Ets1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGMMCAGGARKT---
NNNACAGGAAGTGGN

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AGMMCAGGARKT
--NACAGGAAAT

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AGMMCAGGARKT
--NACAGGAAAT

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AGMMCAGGARKT
--ANCAGGATGT

MA0156.1_FEV/Jaspar

Match Rank:7
Score:0.69
Offset:4
Orientation:forward strand
Alignment:AGMMCAGGARKT
----CAGGAAAT

MA0474.1_Erg/Jaspar

Match Rank:8
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AGMMCAGGARKT--
---ACAGGAAGTGG

MA0473.1_ELF1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGMMCAGGARKT-
GAACCAGGAAGTG

MA0598.1_EHF/Jaspar

Match Rank:10
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:AGMMCAGGARKT
----CAGGAAGG