| p-value: | 1e-5 |
| log p-value: | -1.306e+01 |
| Information Content per bp: | 1.732 |
| Number of Target Sequences with motif | 10.0 |
| Percentage of Target Sequences with motif | 0.12% |
| Number of Background Sequences with motif | 3.8 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 351.2 +/- 179.8bp |
| Average Position of motif in Background | 628.9 +/- 288.3bp |
| Strand Bias (log2 ratio + to - strand density) | -1.1 |
| Multiplicity (# of sites on avg that occur together) | 1.60 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer
| Match Rank: | 1 |
| Score: | 0.67
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AGGGACACTGGC--
NAGGTCANTGACCT |
|
|
|
PB0200.1_Zfp187_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.61
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --AGGGACACTGGC--
NNAGGGACAAGGGCNC |
|
|
|
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
| Match Rank: | 3 |
| Score: | 0.59
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --AGGGACACTGGC
CCAGGAACAG---- |
|
|
|
MA0515.1_Sox6/Jaspar
| Match Rank: | 4 |
| Score: | 0.57
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | AGGGACACTGGC
-AAAACAATGG- |
|
|
|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 5 |
| Score: | 0.54
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | AGGGACACTGGC
--GAACAATGGN |
|
|
|
MA0160.1_NR4A2/Jaspar
| Match Rank: | 6 |
| Score: | 0.53
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | AGGGACACTGGC
AAGGTCAC---- |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 7 |
| Score: | 0.52
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | AGGGACACTGGC
-AGGTCA----- |
|
|
|
PB0133.1_Hic1_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.52
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----AGGGACACTGGC
NNNNTTGGGCACNNCN |
|
|
|
PB0134.1_Hnf4a_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.52
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---AGGGACACTGGC-
NNATTGGACTTTNGNN |
|
|
|
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer
| Match Rank: | 10 |
| Score: | 0.51
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | AGGGACACTGGC-----
-TGGACTTTGNNCTNTG |
|
|
|
