Information for motif34


Reverse Opposite:

p-value:1e-4
log p-value:-1.036e+01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets515.3 +/- 276.2bp
Average Position of motif in Background541.7 +/- 282.7bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.55
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0204.1_Zfp740_2/Jaspar

Match Rank:1
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---TTCCCCCCGG----
AAATTCCCCCCGGAAGT

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTCCCCCCGG
TTCCCGCCWG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTCCCCCCGG
NYTTCCCGCC--

MA0056.1_MZF1_1-4/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTCCCCCCGG
-TCCCCA---

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTCCCCCCGG------
-CCCCCCCGGGGGGGT

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTCCCCCCGG------
-CCCCCCCGGGGGGGT

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCCCCGG----
NTCCCCTCAGGGANT

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTCCCCCCGG-----
-CCCCCCCGGGGGNN

MA0471.1_E2F6/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTCCCCCCGG
NCTTCCCGCCC-

MA0470.1_E2F4/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTCCCCCCGG
NNTTCCCGCCC-