Information for motif35


Reverse Opposite:

p-value:1e-4
log p-value:-1.025e+01
Information Content per bp:1.959
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets402.7 +/- 216.5bp
Average Position of motif in Background328.3 +/- 297.1bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0522.1_Tcf3/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCTACATCTGCT-
--CACAGCTGCAG

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCTACATCTGCT----
CTCAGCAGCTGCTACTG

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CCTACATCTGCT
----CAGCTGNT

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTACATCTGCT
CGACCATCTGTT

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCTACATCTGCT-
---NCAGCTGCTG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCTACATCTGCT
--GCCATCTGTT

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCTACATCTGCT-
---ACAGCTGTTV

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCTACATCTGCT-
---ACAGCTGTTN

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCTACATCTGCT---
CCNNACCATCTGGCCTN

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCTACATCTGCT--
--AGCAGCTGCTNN