Information for motif37


Reverse Opposite:

p-value:1e-3
log p-value:-8.655e+00
Information Content per bp:1.708
Number of Target Sequences with motif270.0
Percentage of Target Sequences with motif3.30%
Number of Background Sequences with motif465.8
Percentage of Background Sequences with motif2.64%
Average Position of motif in Targets600.0 +/- 479.1bp
Average Position of motif in Background649.1 +/- 512.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0527.1_ZBTB33/Jaspar

Match Rank:1
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------GCGAGCGGGT
NAGNTCTCGCGAGAN---

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCGAGCGGGT--
TGGCGCGCGCGCCTGA

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCGAGCGGGT----
TGCGGAGTGGGACTGG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCGAGCGGGT
TGCGTG-----

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCGAGCGGGT
GGCGCGCT---

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCGAGCGGGT
TTGCGTGCVA--

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GCGAGCGGGT
ATAAAGGCGCGCGAT-

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GCGAGCGGGT--
NNNAAGGGGGCGGGNNN

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GCGAGCGGGT--
AANTTCAAGTGGCTTN

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------GCGAGCGGGT
ATAAGGGCGCGCGAT-