Information for motif6


Reverse Opposite:

p-value:1e-14
log p-value:-3.340e+01
Information Content per bp:1.836
Number of Target Sequences with motif1258.0
Percentage of Target Sequences with motif15.36%
Number of Background Sequences with motif2192.6
Percentage of Background Sequences with motif12.43%
Average Position of motif in Targets496.0 +/- 436.7bp
Average Position of motif in Background498.9 +/- 452.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTCAACCTCC
GCCCCGCCCCC

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTCAACCTCC
AGCCACTCAAG----

MA0131.1_HINFP/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTCAACCTCC--
--TAACGTCCGC

MA0162.2_EGR1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCAACCTCC---
CCCCCGCCCCCGCC

MA0528.1_ZNF263/Jaspar

Match Rank:5
Score:0.54
Offset:-8
Orientation:reverse strand
Alignment:--------CTCAACCTCC---
TCCTCCTCCCCCTCCTCCTCC

GFY(?)/Promoter/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTCAACCTCC-
ACTACAATTCCC

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTCAACCTCC-
NAGCCCCGCCCCCN

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCAACCTCC---
-ACCACATCCTGT

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTCAACCTCC
--YAACBGCC

MA0136.1_ELF5/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTCAACCTCC--
---TACTTCCTT