Information for motif7


Reverse Opposite:

p-value:1e-14
log p-value:-3.256e+01
Information Content per bp:1.712
Number of Target Sequences with motif1167.0
Percentage of Target Sequences with motif14.25%
Number of Background Sequences with motif2020.2
Percentage of Background Sequences with motif11.45%
Average Position of motif in Targets474.3 +/- 434.2bp
Average Position of motif in Background465.5 +/- 442.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0471.1_E2F6/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCCAGGCTGGAG--
---GGGCGGGAAGG

MA0469.1_E2F3/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCCAGGCTGGAG
NNGTGNGGGCGGGAG

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCCAGGCTGGAG
--CWGGCGGGAA

MA0470.1_E2F4/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCCAGGCTGGAG--
---GGGCGGGAAGG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCCAGGCTGGAG
--TWGTCTGV--

MA0024.2_E2F1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCCAGGCTGGAG-
--CGGGCGGGAGG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCCAGGCTGGAG--
----GGCGGGAARN

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCCAGGCTGGAG---
---TGGCGGGAAAHB

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCAGGCTGGAG-
--AAGGCAAGTGT

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCCAGGCTGGAG
--CTGTCTGG--