Information for motif1


Reverse Opposite:

p-value:1e-44
log p-value:-1.020e+02
Information Content per bp:1.847
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets444.6 +/- 462.4bp
Average Position of motif in Background851.3 +/- 791.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----SAGCACTGTAAA
NNNNTGAGCACTGTNNG

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-SAGCACTGTAAA---
CAATCACTGGCAGAAT

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-SAGCACTGTAAA----
AGGACGCTGTAAAGGGA

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:SAGCACTGTAAA
AAGCACTTAA--

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-SAGCACTGTAAA---
AAAGACCTGTCAATCC

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-SAGCACTGTAAA----
AAGACGCTGTAAAGCGA

MA0047.2_Foxa2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:SAGCACTGTAAA--
--NCTAAGTAAACA

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----SAGCACTGTAAA
NATTTAAGTACTTNAAA

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--SAGCACTGTAAA
GGGAGGACNG----

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-SAGCACTGTAAA---
AAAGACCTGTCAATAC