Information for motif15


Reverse Opposite:

p-value:1e-10
log p-value:-2.310e+01
Information Content per bp:1.530
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets437.1 +/- 330.5bp
Average Position of motif in Background784.5 +/- 589.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TTCTGGTATT
GGTCTGGCAT-

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTCTGGTATT-----
TNNTTTCGTATTNNANN

PB0020.1_Gabpa_1/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------TTCTGGTATT-
NNNNACTTCCGGTATNN

PB0162.1_Sfpi1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTCTGGTATT--
GGTTCCNNAATTTG

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTCTGGTATT---
NCNTTTGTTATTTNN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTCTGGTATT
NNHTGTGGTTWN

MA0511.1_RUNX2/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TTCTGGTATT
GGGGTTTGTGGTTTG

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTCTGGTATT
CTTCCGGT---

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTCTGGTATT-
-NCTGGAATGC

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TTCTGGTATT-
NNTNNTGTCTGGNNTNG