Information for motif16


Reverse Opposite:

p-value:1e-9
log p-value:-2.126e+01
Information Content per bp:1.707
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets422.3 +/- 343.3bp
Average Position of motif in Background519.8 +/- 513.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGTCGAGTGTGA----
TGCGGAGTGGGACTGG

PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGTCGAGTGTGA--
GCAGCCAAGCGTGACN

MA0014.2_PAX5/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AGTCGAGTGTGA-
GAGGGCAGCCAAGCGTGAC

MA0069.1_Pax6/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGTCGAGTGTGA-
AANTCATGCGTGAA

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGTCGAGTGTGA--
----AGGTGTGAAM

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTCGAGTGTGA
AAGGCAAGTGT--

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGTCGAGTGTGA
-CTYRAGTGSY-

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGTCGAGTGTGA----
NNGCGTGTGTGCNGCN

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGTCGAGTGTGA-----
GAAAAGGTGTGAAAATT

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGTCGAGTGTGA
--TTGAGTGSTT