Information for motif17


Reverse Opposite:

p-value:1e-8
log p-value:-1.867e+01
Information Content per bp:1.722
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets391.7 +/- 251.9bp
Average Position of motif in Background798.9 +/- 328.2bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0083.1_Irx3_1/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AGATGTAGGACG
AAAATACATGTAATACT

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGATGTAGGACG
AATATACATGTAAAATT

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGATGTAGGACG
AATATACATGTAATATA

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGATGTAGGACG
TAAATACATGTAAAATT

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGATGTAGGACG-----
-CTACTAGGATGTNNTN

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AGATGTAGGACG
AATATACATGTAAAACA

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AGATGTAGGACG
AAAATACATGTAAAAAT

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AGATGTAGGACG
GCGGAGGTGTCGCCTC

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGATGTAGGACG----
NNGATCTAGAACCTNNN

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------AGATGTAGGACG
AAGGCCAGATGGTCCGG-