Information for motif19


Reverse Opposite:

p-value:1e-7
log p-value:-1.794e+01
Information Content per bp:1.817
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets452.2 +/- 356.5bp
Average Position of motif in Background284.6 +/- 198.0bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.72
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0024.2_E2F1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCTCYCGCCTCT
CCTCCCGCCCN-

MA0471.1_E2F6/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCTCYCGCCTCT
NCTTCCCGCCC--

MA0470.1_E2F4/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCTCYCGCCTCT
NNTTCCCGCCC--

MA0469.1_E2F3/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCTCYCGCCTCT----
-CTCCCGCCCCCACTC

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCTCYCGCCTCT
NYTTCCCGCC---

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCTCYCGCCTCT---
TACGCCCCGCCACTCTG

MA0516.1_SP2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCTCYCGCCTCT----
-GCCCCGCCCCCTCCC

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCTCYCGCCTCT
-TTCCCGCCWG-

PB0202.1_Zfp410_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTCYCGCCTCT----
TCACCCCGCCCCAAATT

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCTCYCGCCTCT
DTTTCCCGCC---