| p-value: | 1e-7 |
| log p-value: | -1.754e+01 |
| Information Content per bp: | 1.984 |
| Number of Target Sequences with motif | 20.0 |
| Percentage of Target Sequences with motif | 0.24% |
| Number of Background Sequences with motif | 4.4 |
| Percentage of Background Sequences with motif | 0.06% |
| Average Position of motif in Targets | 417.6 +/- 307.9bp |
| Average Position of motif in Background | 1027.2 +/- 352.4bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 1 |
| Score: | 0.65
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GCATCCAGGC-----
SCAGYCADGCATGAC |
|
|
|
PB0159.1_Rfx4_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.64
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GCATCCAGGC--
NNNGTAACTANGNNA |
|
|
|
PB0158.1_Rfx3_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.60
| | Offset: | -7
| | Orientation: | reverse strand |
| Alignment: | -------GCATCCAGGC------
NNTNGNNGTAACCAAGNNNNAGN |
|
|
|
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer
| Match Rank: | 4 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GCATCCAGGC
ACATCCTGNT |
|
|
|
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
| Match Rank: | 5 |
| Score: | 0.59
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | GCATCCAGGC--
----CTAGGCCT |
|
|
|
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 6 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GCATCCAGGC------
GCAGCCAAGCGTGACN |
|
|
|
PB0160.1_Rfxdc2_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.59
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----GCATCCAGGC--
NTNNCGTATCCAAGTNN |
|
|
|
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 8 |
| Score: | 0.58
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | GCATCCAGGC--
----CNAGGCCT |
|
|
|
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.57
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GCATCCAGGC------
CAAATCCAGACATCACA |
|
|
|
PB0077.1_Spdef_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.57
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GCATCCAGGC----
GTACATCCGGATTTTT |
|
|
|
