p-value: | 1e-7 |
log p-value: | -1.754e+01 |
Information Content per bp: | 1.984 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 0.24% |
Number of Background Sequences with motif | 4.4 |
Percentage of Background Sequences with motif | 0.06% |
Average Position of motif in Targets | 417.6 +/- 307.9bp |
Average Position of motif in Background | 1027.2 +/- 352.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCATCCAGGC----- SCAGYCADGCATGAC |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCATCCAGGC-- NNNGTAACTANGNNA |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------GCATCCAGGC------ NNTNGNNGTAACCAAGNNNNAGN |
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SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCATCCAGGC ACATCCTGNT |
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ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GCATCCAGGC-- ----CTAGGCCT |
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PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCATCCAGGC------ GCAGCCAAGCGTGACN |
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PB0160.1_Rfxdc2_2/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GCATCCAGGC-- NTNNCGTATCCAAGTNN |
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ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GCATCCAGGC-- ----CNAGGCCT |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCATCCAGGC------ CAAATCCAGACATCACA |
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PB0077.1_Spdef_1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCATCCAGGC---- GTACATCCGGATTTTT |
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