Information for motif21


Reverse Opposite:

p-value:1e-7
log p-value:-1.694e+01
Information Content per bp:1.651
Number of Target Sequences with motif300.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif206.9
Percentage of Background Sequences with motif2.67%
Average Position of motif in Targets482.7 +/- 441.2bp
Average Position of motif in Background537.2 +/- 411.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGATCACCAT---
CATAAGACCACCATTAC

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGATCACCAT--
TAGTGATCATCATTA

GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGATCACCAT---
NNAGATNVNWATCTN

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGATCACCAT
GGGAGGACNG-

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGATCACCAT
GGATTAGC--

MA0496.1_MAFK/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGATCACCAT---
CTGAGTCAGCAATTT

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GGATCACCAT
CGTTGGGGATTAGCCT

PH0016.1_Cux1_1/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GGATCACCAT-
ACCGGTTGATCACCTGA

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GGATCACCAT
CGCGCCGGGTCACGTA

PH0035.1_Gsc/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GGATCACCAT--
NNAAGGGATTAACGANT