Information for motif22


Reverse Opposite:

p-value:1e-6
log p-value:-1.552e+01
Information Content per bp:1.506
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets358.4 +/- 352.7bp
Average Position of motif in Background522.1 +/- 366.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCCGCTAACCA----
ACTTAGTTAACTAAAAA

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTCCGCTAACCA---
-----NAAACCACAG

PH0167.1_Tcf1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCCGCTAACCA----
CCTTAGTTAACTAAAAT

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CTCCGCTAACCA----
------AAACCACAGC

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTCCGCTAACCA
GCTCCG-------

TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTCCGCTAACCA
TGWCCTCARNTGACC-

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTCCGCTAACCA----
------AAACCACANN

MA0073.1_RREB1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTCCGCTAACCA----------
--CCCCAAACCACCCCCCCCCA

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTCCGCTAACCA-----
-----NWAACCACADNN

MA0511.1_RUNX2/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTCCGCTAACCA--------
-----CAAACCACAAACCCC