Information for motif23


Reverse Opposite:

p-value:1e-6
log p-value:-1.547e+01
Information Content per bp:1.984
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets423.1 +/- 461.7bp
Average Position of motif in Background1009.4 +/- 528.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GTGGGAGCTA
--CGGAGC--

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTGGGAGCTA
TGCGTGGGYG---

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTGGGAGCTA
NGCGTGGGCGGR-

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTGGGAGCTA
GGGCGGGACC--

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGAGCTA
CSTGGGAAAD-

MA0472.1_EGR2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTGGGAGCTA-
GTGCGTGGGCGGGNG

MA0469.1_E2F3/Jaspar

Match Rank:7
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------GTGGGAGCTA
NNGTGNGGGCGGGAG---

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GTGGGAGCTA
TGCGGAGTGGGACTGG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGGGAGCTA
GGCGGGAARN-

MA0471.1_E2F6/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTGGGAGCTA
GGGCGGGAAGG-