Information for motif26


Reverse Opposite:

p-value:1e-4
log p-value:-1.074e+01
Information Content per bp:1.719
Number of Target Sequences with motif562.0
Percentage of Target Sequences with motif6.87%
Number of Background Sequences with motif448.6
Percentage of Background Sequences with motif5.78%
Average Position of motif in Targets457.2 +/- 443.0bp
Average Position of motif in Background547.9 +/- 511.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCCTGGTGTCA
NNCACCTGNN----

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTCCTGGTGTCA
ACATCCTGNT----

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTGGTGTCA
CCCCCTGCTGTG-

MA0103.2_ZEB1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCCTGGTGTCA
CCTCACCTG------

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCCTGGTGTCA-----
TNNNNGGTGTCATNTNT

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CTCCTGGTGTCA
NNTNCGCACCTGTNGAN-

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCCTGGTGTCA-----
NTNNNGGGGTCANGNNN

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCCTGGTGTCA-----
CTCCAGGGGTCAATTGA

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:-9
Orientation:forward strand
Alignment:---------CTCCTGGTGTCA
CNNBRGCGCCCCCTGSTGGC-

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTGGTGTCA--
TNTCCTGCTGTGNNG