p-value: | 1e-3 |
log p-value: | -7.695e+00 |
Information Content per bp: | 1.543 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 0.13% |
Number of Background Sequences with motif | 3.7 |
Percentage of Background Sequences with motif | 0.05% |
Average Position of motif in Targets | 210.9 +/- 154.2bp |
Average Position of motif in Background | 248.7 +/- 118.5bp |
Strand Bias (log2 ratio + to - strand density) | 1.7 |
Multiplicity (# of sites on avg that occur together) | 1.91 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
MA0072.1_RORA_2/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GACTGTCCTA------ --TTGACCTANTTATN |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GACTGTCCTA ---TGACCT- |
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AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GACTGTCCTA-- --CTGTTCCTGG |
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MA0071.1_RORA_1/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GACTGTCCTA--- ---TGACCTTGAT |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GACTGTCCTA-- --CTGACCTTTG |
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PB0181.1_Spdef_2/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GACTGTCCTA---- GATAACATCCTAGTAG |
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MA0160.1_NR4A2/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GACTGTCCTA --GTGACCTT |
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MA0107.1_RELA/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GACTGTCCTA GGGAATTTCC-- |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GACTGTCCTA NNACTTGCCTT |
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MA0105.3_NFKB1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GACTGTCCTA GGGAATTTCCC- |
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