Information for motif3


Reverse Opposite:

p-value:1e-19
log p-value:-4.375e+01
Information Content per bp:1.458
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets482.9 +/- 477.4bp
Average Position of motif in Background298.3 +/- 294.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GAGGTGAYACCA
-AGGTGTCA---

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GAGGTGAYACCA-
GCGGAGGTGTCGCCTC

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAGGTGAYACCA
-AGGTGTGAAM-

MA0595.1_SREBF1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGAYACCA
GTGGGGTGAT----

MA0596.1_SREBF2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAGGTGAYACCA
ATGGGGTGAT----

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAGGTGAYACCA
-AGGTGTTAAT-

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAGGTGAYACCA-
-NGATGACGTCAT

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGGTGAYACCA--
AAAGATGATGTCATC

POL002.1_INR/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGGTGAYACCA
NNNANTGA-----

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGGTGAYACCA
CGGAAGTGAAAC--