Information for motif31


Reverse Opposite:

p-value:1e-1
log p-value:-2.797e+00
Information Content per bp:1.658
Number of Target Sequences with motif824.0
Percentage of Target Sequences with motif10.07%
Number of Background Sequences with motif741.3
Percentage of Background Sequences with motif9.56%
Average Position of motif in Targets429.1 +/- 390.9bp
Average Position of motif in Background537.9 +/- 459.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCATCGTGGT
GTCATN-----

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCATCGTGGT
ACATCCTGNT

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCATCGTGGT------
NNANTGGTGGTCTTNNN

MA0130.1_ZNF354C/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TCATCGTGGT-
-----GTGGAT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCATCGTGGT---
-NNHTGTGGTTWN

MA0078.1_Sox17/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCATCGTGGT
CTCATTGTC--

PB0185.1_Tcf1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCATCGTGGT--
NNTAATCCNGNCNN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCATCGTGGT---
---CTGTGGTTTN

MA0511.1_RUNX2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCATCGTGGT---
GGGGTTTGTGGTTTG

MA0095.2_YY1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TCATCGTGGT
GCNGCCATCTTG--