p-value: | 1e0 |
log p-value: | -2.287e+00 |
Information Content per bp: | 1.840 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.07% |
Number of Background Sequences with motif | 3.1 |
Percentage of Background Sequences with motif | 0.04% |
Average Position of motif in Targets | 335.2 +/- 216.0bp |
Average Position of motif in Background | 1310.4 +/- 57.5bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
MA0143.3_Sox2/Jaspar
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCCTTAGTCG -CCTTTGTT- |
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MA0132.1_Pdx1/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCCTTAGTCG -AATTAG--- |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCCTTAGTCG -CCWTTGTY- |
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Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TCCTTAGTCG BCMATTAG--- |
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PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TCCTTAGTCG---- NNAATTAGTCACGGT |
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PB0032.1_IRC900814_1/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TCCTTAGTCG----- GNNATTTGTCGTAANN |
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PB0166.1_Sox12_2/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCCTTAGTCG---- ANTCCTTTGTCTNNNN |
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MA0109.1_Hltf/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCCTTAGTCG AACCTTATAT- |
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PH0027.1_Emx2/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TCCTTAGTCG-- ACCACTAATTAGTGGAC |
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PH0031.1_Evx1/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TCCTTAGTCG-- AGAACTAATTAGTGGAC |
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