| p-value: | 1e0 |
| log p-value: | -2.078e+00 |
| Information Content per bp: | 1.865 |
| Number of Target Sequences with motif | 384.0 |
| Percentage of Target Sequences with motif | 4.69% |
| Number of Background Sequences with motif | 343.2 |
| Percentage of Background Sequences with motif | 4.43% |
| Average Position of motif in Targets | 442.9 +/- 444.6bp |
| Average Position of motif in Background | 517.4 +/- 410.3bp |
| Strand Bias (log2 ratio + to - strand density) | 0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.05 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PH0078.1_Hoxd13/Jaspar
| Match Rank: | 1 |
| Score: | 0.76
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----TTTTTTTGAGAC
NNANTTTTATTGGNNN |
|
|
|
PB0182.1_Srf_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.73
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----TTTTTTTGAGAC
NNNNTTTTTTTTTNAAC |
|
|
|
PB0116.1_Elf3_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.72
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------TTTTTTTGAGAC
GNATTTTTTTTTTGANC- |
|
|
|
PB0192.1_Tcfap2e_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.71
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TTTTTTTGAGAC
TTTTTTTTCNNGTN |
|
|
|
PH0057.1_Hoxb13/Jaspar
| Match Rank: | 5 |
| Score: | 0.69
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----TTTTTTTGAGAC
NNAATTTTATTGGNTN |
|
|
|
PH0075.1_Hoxd10/Jaspar
| Match Rank: | 6 |
| Score: | 0.67
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----TTTTTTTGAGAC
NTNAATTTTATTGNATT |
|
|
|
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
| Match Rank: | 7 |
| Score: | 0.65
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TTTTTTTGAGAC
TTTTATTRGN-- |
|
|
|
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
| Match Rank: | 8 |
| Score: | 0.63
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TTTTTTTGAGAC
TTTAATTGCN-- |
|
|
|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 9 |
| Score: | 0.62
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTTTTTTGAGAC
NTTTTATGAC--- |
|
|
|
PB0186.1_Tcf3_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.62
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TTTTTTTGAGAC-
NNTTTNTTTTNGNNN |
|
|
|
